Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSCP56915 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GSCP56915 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GSCP56915 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.3■□□□□ 0.2
GSCP56915 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.3■□□□□ 0.2
GSCP56915 AC093214.1-201ENST00000511688 1107 ntBASIC16.3■□□□□ 0.2
GSCP56915 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.3■□□□□ 0.2
GSCP56915 RARRES2P5-201ENST00000564013 466 ntBASIC16.3■□□□□ 0.2
GSCP56915 AC104794.3-201ENST00000566840 1248 ntBASIC16.3■□□□□ 0.2
GSCP56915 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.3■□□□□ 0.2
GSCP56915 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.3■□□□□ 0.2
GSCP56915 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.3■□□□□ 0.2
GSCP56915 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.3■□□□□ 0.2
GSCP56915 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GSCP56915 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.3■□□□□ 0.2
GSCP56915 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.29■□□□□ 0.2
GSCP56915 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.29■□□□□ 0.2
GSCP56915 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 CLK3P2-201ENST00000427566 1453 ntBASIC16.29■□□□□ 0.2
GSCP56915 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 CICP11-201ENST00000434745 2827 ntBASIC16.29■□□□□ 0.2
GSCP56915 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
GSCP56915 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GSCP56915 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.29■□□□□ 0.2
GSCP56915 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 LINC00552-201ENST00000625151 2579 ntBASIC16.29■□□□□ 0.2
GSCP56915 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.29■□□□□ 0.2
GSCP56915 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.29■□□□□ 0.2
GSCP56915 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 RRP7BP-205ENST00000566851 833 ntBASIC16.29■□□□□ 0.2
GSCP56915 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.29■□□□□ 0.2
GSCP56915 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.29■□□□□ 0.2
GSCP56915 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.29■□□□□ 0.2
GSCP56915 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.29■□□□□ 0.2
GSCP56915 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.29■□□□□ 0.2
GSCP56915 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GSCP56915 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 AGAP7P-201ENST00000582299 2062 ntBASIC16.29■□□□□ 0.2
GSCP56915 AGAP14-201ENST00000624701 2060 ntBASIC16.29■□□□□ 0.2
GSCP56915 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.29■□□□□ 0.2
GSCP56915 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 ZBED1P1-201ENST00000502364 1930 ntBASIC16.29■□□□□ 0.2
GSCP56915 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.29■□□□□ 0.2
GSCP56915 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
GSCP56915 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
GSCP56915 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GSCP56915 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
GSCP56915 AC091951.1-201ENST00000512854 2465 ntBASIC16.28■□□□□ 0.2
GSCP56915 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
GSCP56915 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSCP56915 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSCP56915 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.28■□□□□ 0.2
GSCP56915 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSCP56915 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSCP56915 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GSCP56915 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.28■□□□□ 0.2
GSCP56915 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms