Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GFRA1P56159 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
GFRA1P56159 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.76□□□□□ -0.21
GFRA1P56159 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.76□□□□□ -0.21
GFRA1P56159 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.76□□□□□ -0.21
GFRA1P56159 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.76□□□□□ -0.21
GFRA1P56159 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.76□□□□□ -0.21
GFRA1P56159 KRT223P-202ENST00000449164 1292 ntBASIC13.76□□□□□ -0.21
GFRA1P56159 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.76□□□□□ -0.21
GFRA1P56159 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.76□□□□□ -0.21
GFRA1P56159 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.76□□□□□ -0.21
GFRA1P56159 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GFRA1P56159 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GFRA1P56159 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.76□□□□□ -0.21
GFRA1P56159 AC132938.4-201ENST00000623835 848 ntBASIC13.76□□□□□ -0.21
GFRA1P56159 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.76□□□□□ -0.21
GFRA1P56159 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
GFRA1P56159 AC105917.1-201ENST00000506637 2539 ntBASIC13.76□□□□□ -0.21
GFRA1P56159 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
GFRA1P56159 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.76□□□□□ -0.21
GFRA1P56159 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 REXO1L4P-201ENST00000605109 1937 ntBASIC13.76□□□□□ -0.21
GFRA1P56159 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GFRA1P56159 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.76□□□□□ -0.21
GFRA1P56159 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
GFRA1P56159 LRRC59-203ENST00000576448 1531 ntBASIC13.75□□□□□ -0.21
GFRA1P56159 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GFRA1P56159 AC012508.2-201ENST00000567613 1472 ntBASIC13.75□□□□□ -0.21
GFRA1P56159 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 AL360270.3-201ENST00000609118 1348 ntBASIC13.75□□□□□ -0.21
GFRA1P56159 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
GFRA1P56159 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
GFRA1P56159 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.75□□□□□ -0.21
GFRA1P56159 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
GFRA1P56159 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 HLA-K-203ENST00000430151 1046 ntBASIC13.75□□□□□ -0.21
GFRA1P56159 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.75□□□□□ -0.21
GFRA1P56159 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.75□□□□□ -0.21
GFRA1P56159 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.75□□□□□ -0.21
GFRA1P56159 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.75□□□□□ -0.21
GFRA1P56159 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GFRA1P56159 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 AL603764.1-201ENST00000636452 321 ntBASIC13.75□□□□□ -0.21
GFRA1P56159 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.75□□□□□ -0.21
GFRA1P56159 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFRA1P56159 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.74□□□□□ -0.21
GFRA1P56159 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GFRA1P56159 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFRA1P56159 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms