Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 ACTBP8-201ENST00000403258 1108 ntBASIC16.82■□□□□ 0.28
NCKAP1LP55160 BAATP1-201ENST00000412284 1225 ntBASIC16.82■□□□□ 0.28
NCKAP1LP55160 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 KRT17P7-201ENST00000451704 1104 ntBASIC16.82■□□□□ 0.28
NCKAP1LP55160 PTP4A1P2-201ENST00000546033 454 ntBASIC16.82■□□□□ 0.28
NCKAP1LP55160 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 REXO1L2P-201ENST00000425429 2069 ntBASIC16.82■□□□□ 0.28
NCKAP1LP55160 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.82■□□□□ 0.28
NCKAP1LP55160 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NCKAP1LP55160 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 REXO1L5P-201ENST00000622260 2098 ntBASIC16.81■□□□□ 0.28
NCKAP1LP55160 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 AC005034.1-201ENST00000426657 489 ntBASIC16.81■□□□□ 0.28
NCKAP1LP55160 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 AL035252.4-201ENST00000624174 288 ntBASIC16.81■□□□□ 0.28
NCKAP1LP55160 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.81■□□□□ 0.28
NCKAP1LP55160 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NCKAP1LP55160 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.8■□□□□ 0.28
NCKAP1LP55160 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 ZBED1P1-201ENST00000502364 1930 ntBASIC16.8■□□□□ 0.28
NCKAP1LP55160 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 KRT8P35-201ENST00000483942 1338 ntBASIC16.8■□□□□ 0.28
NCKAP1LP55160 AC134312.5-201ENST00000568031 1313 ntBASIC16.8■□□□□ 0.28
NCKAP1LP55160 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NCKAP1LP55160 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 AP001889.1-201ENST00000525414 633 ntBASIC16.8■□□□□ 0.28
NCKAP1LP55160 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.8■□□□□ 0.28
NCKAP1LP55160 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms