Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.73□□□□□ -0.05
NR1H2P55055 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H2P55055 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H2P55055 AL513210.1-201ENST00000629608 234 ntBASIC14.73□□□□□ -0.05
NR1H2P55055 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NR1H2P55055 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.73□□□□□ -0.05
NR1H2P55055 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NR1H2P55055 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.73□□□□□ -0.05
NR1H2P55055 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NR1H2P55055 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 AC099521.3-201ENST00000624251 2938 ntBASIC14.72□□□□□ -0.05
NR1H2P55055 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NR1H2P55055 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.72□□□□□ -0.05
NR1H2P55055 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NR1H2P55055 TSEN15P1-201ENST00000423257 515 ntBASIC14.72□□□□□ -0.05
NR1H2P55055 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 FAM8A3P-201ENST00000427218 844 ntBASIC14.72□□□□□ -0.05
NR1H2P55055 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.72□□□□□ -0.05
NR1H2P55055 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.72□□□□□ -0.05
NR1H2P55055 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 AC005412.3-201ENST00000580309 715 ntBASIC14.72□□□□□ -0.05
NR1H2P55055 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.72□□□□□ -0.05
NR1H2P55055 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.72□□□□□ -0.05
NR1H2P55055 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NR1H2P55055 U82695.1-201ENST00000635752 1889 ntBASIC14.72□□□□□ -0.05
NR1H2P55055 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NR1H2P55055 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.71□□□□□ -0.05
NR1H2P55055 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NR1H2P55055 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms