Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
EPHB4P54760 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.36■□□□□ 0.37
EPHB4P54760 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.36■□□□□ 0.37
EPHB4P54760 TARDBPP1-201ENST00000442013 1203 ntBASIC17.36■□□□□ 0.37
EPHB4P54760 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 VDAC1P7-201ENST00000462417 847 ntBASIC17.36■□□□□ 0.37
EPHB4P54760 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.36■□□□□ 0.37
EPHB4P54760 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
EPHB4P54760 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.36■□□□□ 0.37
EPHB4P54760 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
EPHB4P54760 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
EPHB4P54760 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
EPHB4P54760 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.36■□□□□ 0.37
EPHB4P54760 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
EPHB4P54760 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHB4P54760 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHB4P54760 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 PPT1-215ENST00000641471 2368 ntBASIC17.35■□□□□ 0.37
EPHB4P54760 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHB4P54760 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 FXNP2-201ENST00000411625 547 ntBASIC17.35■□□□□ 0.37
EPHB4P54760 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHB4P54760 AKR7A2P1-201ENST00000460134 915 ntBASIC17.35■□□□□ 0.37
EPHB4P54760 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.35■□□□□ 0.37
EPHB4P54760 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHB4P54760 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.35■□□□□ 0.37
EPHB4P54760 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.35■□□□□ 0.37
EPHB4P54760 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHB4P54760 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.35■□□□□ 0.37
EPHB4P54760 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.35■□□□□ 0.37
EPHB4P54760 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.35■□□□□ 0.37
EPHB4P54760 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 FAM45BP-202ENST00000592932 1624 ntBASIC17.35■□□□□ 0.37
EPHB4P54760 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
EPHB4P54760 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
EPHB4P54760 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
EPHB4P54760 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
EPHB4P54760 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms