Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
EFNA3P52797 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.4□□□□□ -0.1
EFNA3P52797 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
EFNA3P52797 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.4□□□□□ -0.1
EFNA3P52797 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.4□□□□□ -0.1
EFNA3P52797 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
EFNA3P52797 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.4□□□□□ -0.1
EFNA3P52797 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.4□□□□□ -0.1
EFNA3P52797 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.4□□□□□ -0.1
EFNA3P52797 AL022328.1-201ENST00000610050 478 ntBASIC14.4□□□□□ -0.1
EFNA3P52797 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.4□□□□□ -0.1
EFNA3P52797 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 AL158070.2-201ENST00000623713 1621 ntBASIC14.4□□□□□ -0.1
EFNA3P52797 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
EFNA3P52797 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.4□□□□□ -0.1
EFNA3P52797 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
EFNA3P52797 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
EFNA3P52797 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 AL138709.1-201ENST00000614840 1693 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 C18orf15-201ENST00000623680 2534 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 AC104457.1-201ENST00000401024 814 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.39□□□□□ -0.11
EFNA3P52797 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.39□□□□□ -0.11
EFNA3P52797 AL359881.2-201ENST00000602973 570 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 MIR6805-201ENST00000615055 62 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 AP005019.2-201ENST00000615104 511 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 BX539320.1-201ENST00000623759 877 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 PRSS30P-206ENST00000641773 873 ntBASIC14.39□□□□□ -0.11
EFNA3P52797 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.39□□□□□ -0.11
EFNA3P52797 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
EFNA3P52797 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
EFNA3P52797 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
EFNA3P52797 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
EFNA3P52797 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 AC067930.6-201ENST00000623257 4947 ntBASIC14.38□□□□□ -0.11
EFNA3P52797 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.38□□□□□ -0.11
EFNA3P52797 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
EFNA3P52797 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.38□□□□□ -0.11
EFNA3P52797 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
EFNA3P52797 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms