Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN3P51790 MIR4741-201ENST00000579822 90 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN3P51790 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLCN3P51790 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 ENPP7P14-201ENST00000621765 1040 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN3P51790 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN3P51790 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.85■□□□□ 0.29
CLCN3P51790 AL354989.2-201ENST00000435838 1540 ntBASIC16.85■□□□□ 0.29
CLCN3P51790 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN3P51790 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCN3P51790 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLCN3P51790 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CLCN3P51790 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CLCN3P51790 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN3P51790 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN3P51790 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN3P51790 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN3P51790 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN3P51790 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLCN3P51790 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN3P51790 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.84■□□□□ 0.29
CLCN3P51790 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN3P51790 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN3P51790 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.84■□□□□ 0.29
CLCN3P51790 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLCN3P51790 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLCN3P51790 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN3P51790 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.84■□□□□ 0.29
CLCN3P51790 AC007950.2-201ENST00000615045 2347 ntBASIC16.84■□□□□ 0.29
CLCN3P51790 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN3P51790 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.83■□□□□ 0.29
CLCN3P51790 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN3P51790 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.83■□□□□ 0.29
CLCN3P51790 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN3P51790 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN3P51790 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CLCN3P51790 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN3P51790 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLCN3P51790 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.83■□□□□ 0.28
CLCN3P51790 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCN3P51790 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLCN3P51790 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCN3P51790 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCN3P51790 FAM86HP-204ENST00000513466 959 ntBASIC16.83■□□□□ 0.28
CLCN3P51790 AC022616.1-201ENST00000518688 554 ntBASIC16.83■□□□□ 0.28
CLCN3P51790 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCN3P51790 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.83■□□□□ 0.28
CLCN3P51790 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN3P51790 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.83■□□□□ 0.28
CLCN3P51790 AC087481.3-201ENST00000602886 1894 ntBASIC16.83■□□□□ 0.28
CLCN3P51790 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 MIR6869-201ENST00000619434 62 ntBASIC16.83■□□□□ 0.28
CLCN3P51790 AC132872.4-202ENST00000622924 2756 ntBASIC16.83■□□□□ 0.28
CLCN3P51790 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN3P51790 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CLCN3P51790 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN3P51790 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLCN3P51790 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms