Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.22■□□□□ 0.51
TNNI2P48788 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TNNI2P48788 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 ELK2AP-201ENST00000392510 1007 ntBASIC18.22■□□□□ 0.51
TNNI2P48788 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.22■□□□□ 0.51
TNNI2P48788 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC18.22■□□□□ 0.51
TNNI2P48788 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.22■□□□□ 0.51
TNNI2P48788 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.22■□□□□ 0.51
TNNI2P48788 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TNNI2P48788 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNNI2P48788 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TNNI2P48788 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNNI2P48788 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 AC112504.1-201ENST00000623415 1841 ntBASIC18.21■□□□□ 0.51
TNNI2P48788 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TNNI2P48788 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.21■□□□□ 0.51
TNNI2P48788 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.21■□□□□ 0.51
TNNI2P48788 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.21■□□□□ 0.51
TNNI2P48788 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 REEP1-202ENST00000453231 940 ntTSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 HIST2H2BC-201ENST00000498492 580 ntBASIC18.21■□□□□ 0.51
TNNI2P48788 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 RERG-205ENST00000537647 935 ntTSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.21■□□□□ 0.51
TNNI2P48788 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.21■□□□□ 0.51
TNNI2P48788 PPY2P-201ENST00000582808 702 ntBASIC18.21■□□□□ 0.51
TNNI2P48788 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 AL603764.1-201ENST00000636452 321 ntBASIC18.21■□□□□ 0.51
TNNI2P48788 AL645728.2-202ENST00000641679 227 ntBASIC18.21■□□□□ 0.51
TNNI2P48788 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 AC018735.1-201ENST00000437208 1502 ntBASIC18.21■□□□□ 0.51
TNNI2P48788 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.21■□□□□ 0.51
TNNI2P48788 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 AC022188.1-201ENST00000620960 1664 ntBASIC18.21■□□□□ 0.51
TNNI2P48788 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TNNI2P48788 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TNNI2P48788 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.21■□□□□ 0.51
TNNI2P48788 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TNNI2P48788 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TNNI2P48788 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
TNNI2P48788 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.2■□□□□ 0.5
TNNI2P48788 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TNNI2P48788 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.2■□□□□ 0.5
TNNI2P48788 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.2■□□□□ 0.5
TNNI2P48788 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TNNI2P48788 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 AC008741.2-201ENST00000612792 3115 ntBASIC18.2■□□□□ 0.5
TNNI2P48788 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.2■□□□□ 0.5
TNNI2P48788 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TNNI2P48788 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TNNI2P48788 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.2■□□□□ 0.5
TNNI2P48788 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 AC022616.1-201ENST00000518688 554 ntBASIC18.2■□□□□ 0.5
TNNI2P48788 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.2■□□□□ 0.5
TNNI2P48788 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.2■□□□□ 0.5
TNNI2P48788 RN7SL713P-201ENST00000582127 302 ntBASIC18.2■□□□□ 0.5
TNNI2P48788 RN7SL190P-201ENST00000582519 257 ntBASIC18.2■□□□□ 0.5
TNNI2P48788 NDUFV2P1-201ENST00000596415 907 ntBASIC18.2■□□□□ 0.5
TNNI2P48788 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TNNI2P48788 AC007663.3-201ENST00000609632 465 ntBASIC18.2■□□□□ 0.5
TNNI2P48788 ZACNP1-201ENST00000612259 710 ntBASIC18.2■□□□□ 0.5
TNNI2P48788 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.2■□□□□ 0.5
TNNI2P48788 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.2■□□□□ 0.5
TNNI2P48788 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.2■□□□□ 0.5
TNNI2P48788 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TNNI2P48788 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TNNI2P48788 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms