Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
CKS2P33552 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CKS2P33552 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS2P33552 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 LAGE3P1-201ENST00000425356 484 ntBASIC11.41□□□□□ -0.58
CKS2P33552 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CKS2P33552 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS2P33552 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.41□□□□□ -0.58
CKS2P33552 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.41□□□□□ -0.58
CKS2P33552 SART3-203ENST00000546611 1184 ntBASIC11.41□□□□□ -0.58
CKS2P33552 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.41□□□□□ -0.58
CKS2P33552 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
CKS2P33552 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.41□□□□□ -0.58
CKS2P33552 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.41□□□□□ -0.58
CKS2P33552 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS2P33552 AL645728.2-201ENST00000641974 660 ntBASIC11.41□□□□□ -0.58
CKS2P33552 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CKS2P33552 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS2P33552 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 AC097359.2-201ENST00000604992 2389 ntBASIC11.41□□□□□ -0.58
CKS2P33552 MTHFR-210ENST00000641407 2387 ntBASIC11.41□□□□□ -0.58
CKS2P33552 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS2P33552 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS2P33552 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.41□□□□□ -0.58
CKS2P33552 AC073439.1-201ENST00000624121 1774 ntBASIC11.41□□□□□ -0.58
CKS2P33552 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CKS2P33552 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 BNIP3P1-202ENST00000550043 1585 ntBASIC11.41□□□□□ -0.58
CKS2P33552 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CKS2P33552 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CKS2P33552 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS2P33552 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CKS2P33552 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CKS2P33552 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 AC092135.3-201ENST00000624151 1846 ntBASIC11.4□□□□□ -0.58
CKS2P33552 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CKS2P33552 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.4□□□□□ -0.58
CKS2P33552 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CKS2P33552 MRPL20P1-201ENST00000400819 433 ntBASIC11.4□□□□□ -0.58
CKS2P33552 RPL5P21-201ENST00000404620 815 ntBASIC11.4□□□□□ -0.58
CKS2P33552 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 DUSP5P1-201ENST00000441325 1139 ntBASIC11.4□□□□□ -0.58
CKS2P33552 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.4□□□□□ -0.58
CKS2P33552 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
CKS2P33552 AC008667.4-201ENST00000607370 168 ntBASIC11.4□□□□□ -0.58
CKS2P33552 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.4□□□□□ -0.58
CKS2P33552 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 AC092053.3-201ENST00000641308 4975 ntBASIC11.4□□□□□ -0.58
CKS2P33552 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CKS2P33552 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.4□□□□□ -0.58
CKS2P33552 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 AL691432.1-201ENST00000596308 1422 ntBASIC11.4□□□□□ -0.58
CKS2P33552 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
CKS2P33552 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CKS2P33552 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.4□□□□□ -0.58
CKS2P33552 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS2P33552 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
CKS2P33552 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.4□□□□□ -0.59
CKS2P33552 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.4□□□□□ -0.59
CKS2P33552 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms