Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 AC009093.2-202ENST00000620513 2079 ntBASIC21.19■□□□□ 0.98
CPS1P31327 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPS1P31327 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CPS1P31327 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CPS1P31327 AC244394.1-201ENST00000435000 1665 ntBASIC21.19■□□□□ 0.98
CPS1P31327 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CPS1P31327 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CPS1P31327 KLF2P1-201ENST00000447438 1042 ntBASIC21.19■□□□□ 0.98
CPS1P31327 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC21.19■□□□□ 0.98
CPS1P31327 MRPL22P1-201ENST00000505398 616 ntBASIC21.19■□□□□ 0.98
CPS1P31327 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC21.19■□□□□ 0.98
CPS1P31327 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
CPS1P31327 PTPN20CP-201ENST00000614090 920 ntBASIC21.19■□□□□ 0.98
CPS1P31327 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC21.19■□□□□ 0.98
CPS1P31327 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.19■□□□□ 0.98
CPS1P31327 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CPS1P31327 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 FKBP4P6-201ENST00000457486 1332 ntBASIC21.18■□□□□ 0.98
CPS1P31327 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
CPS1P31327 MST1L-201ENST00000442552 2185 ntBASIC21.18■□□□□ 0.98
CPS1P31327 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.18■□□□□ 0.98
CPS1P31327 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CPS1P31327 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CPS1P31327 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CPS1P31327 AC011840.2-201ENST00000563063 1520 ntBASIC21.18■□□□□ 0.98
CPS1P31327 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC21.18■□□□□ 0.98
CPS1P31327 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC21.18■□□□□ 0.98
CPS1P31327 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 DUTP3-201ENST00000450025 415 ntBASIC21.18■□□□□ 0.98
CPS1P31327 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC21.18■□□□□ 0.98
CPS1P31327 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CPS1P31327 AC026434.2-201ENST00000506094 1078 ntBASIC21.18■□□□□ 0.98
CPS1P31327 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC21.18■□□□□ 0.98
CPS1P31327 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC21.18■□□□□ 0.98
CPS1P31327 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CPS1P31327 LINC01783-202ENST00000614408 828 ntBASIC21.18■□□□□ 0.98
CPS1P31327 BX284668.2-205ENST00000619677 828 ntBASIC21.18■□□□□ 0.98
CPS1P31327 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CPS1P31327 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CPS1P31327 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CPS1P31327 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.17■□□□□ 0.98
CPS1P31327 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.17■□□□□ 0.98
CPS1P31327 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CPS1P31327 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.17■□□□□ 0.98
CPS1P31327 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC21.17■□□□□ 0.98
CPS1P31327 KRT17P4-201ENST00000429445 819 ntBASIC21.17■□□□□ 0.98
CPS1P31327 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CPS1P31327 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC21.17■□□□□ 0.98
CPS1P31327 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC21.17■□□□□ 0.98
CPS1P31327 AC005041.3-201ENST00000606287 649 ntBASIC21.17■□□□□ 0.98
CPS1P31327 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC21.17■□□□□ 0.98
CPS1P31327 AC002472.4-201ENST00000641915 272 ntBASIC21.17■□□□□ 0.98
CPS1P31327 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC21.17■□□□□ 0.98
CPS1P31327 TNRC18P3-201ENST00000441896 2691 ntBASIC21.17■□□□□ 0.98
CPS1P31327 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CPS1P31327 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CPS1P31327 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC21.17■□□□□ 0.98
CPS1P31327 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.16■□□□□ 0.98
CPS1P31327 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPS1P31327 AC244197.1-201ENST00000456494 951 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms