Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC19.63■□□□□ 0.73
RXRBP28702 AL118522.1-201ENST00000611368 560 ntBASIC19.63■□□□□ 0.73
RXRBP28702 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RXRBP28702 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC19.63■□□□□ 0.73
RXRBP28702 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC19.63■□□□□ 0.73
RXRBP28702 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.63■□□□□ 0.73
RXRBP28702 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC19.63■□□□□ 0.73
RXRBP28702 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.63■□□□□ 0.73
RXRBP28702 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.63■□□□□ 0.73
RXRBP28702 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.63■□□□□ 0.73
RXRBP28702 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.63■□□□□ 0.73
RXRBP28702 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RXRBP28702 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.62■□□□□ 0.73
RXRBP28702 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRBP28702 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRBP28702 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RXRBP28702 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRBP28702 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RXRBP28702 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRBP28702 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RXRBP28702 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC19.62■□□□□ 0.73
RXRBP28702 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRBP28702 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRBP28702 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC19.62■□□□□ 0.73
RXRBP28702 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.62■□□□□ 0.73
RXRBP28702 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC19.62■□□□□ 0.73
RXRBP28702 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC19.62■□□□□ 0.73
RXRBP28702 FBXO36P1-201ENST00000579006 471 ntBASIC19.62■□□□□ 0.73
RXRBP28702 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RXRBP28702 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.62■□□□□ 0.73
RXRBP28702 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
RXRBP28702 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RXRBP28702 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RXRBP28702 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.62■□□□□ 0.73
RXRBP28702 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RXRBP28702 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RXRBP28702 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.61■□□□□ 0.73
RXRBP28702 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RXRBP28702 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC19.61■□□□□ 0.73
RXRBP28702 RHOQP2-201ENST00000449922 579 ntBASIC19.61■□□□□ 0.73
RXRBP28702 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RXRBP28702 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC19.61■□□□□ 0.73
RXRBP28702 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC19.61■□□□□ 0.73
RXRBP28702 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC19.61■□□□□ 0.73
RXRBP28702 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RXRBP28702 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
RXRBP28702 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RXRBP28702 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC19.61■□□□□ 0.73
RXRBP28702 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC19.61■□□□□ 0.73
RXRBP28702 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RXRBP28702 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RXRBP28702 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRBP28702 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRBP28702 UBALD1-205ENST00000590891 2641 ntBASIC19.6■□□□□ 0.73
RXRBP28702 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 AL109809.1-201ENST00000418979 1367 ntBASIC19.6■□□□□ 0.73
RXRBP28702 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RXRBP28702 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RXRBP28702 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRBP28702 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RXRBP28702 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.6■□□□□ 0.73
RXRBP28702 CASP2-203ENST00000392925 616 ntTSL 3 BASIC19.6■□□□□ 0.73
RXRBP28702 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RXRBP28702 DKKL1P1-201ENST00000400550 698 ntBASIC19.6■□□□□ 0.73
RXRBP28702 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRBP28702 RHEB-207ENST00000496004 744 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRBP28702 ALG1L3P-201ENST00000503331 765 ntBASIC19.6■□□□□ 0.73
RXRBP28702 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC19.6■□□□□ 0.73
RXRBP28702 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.6■□□□□ 0.73
RXRBP28702 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC19.6■□□□□ 0.73
RXRBP28702 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms