Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 ACKR1-201ENST00000368121 1240 ntBASIC13.98□□□□□ -0.17
GDF1P27539 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GDF1P27539 MIR1909-201ENST00000411312 80 ntBASIC13.98□□□□□ -0.17
GDF1P27539 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.98□□□□□ -0.17
GDF1P27539 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.98□□□□□ -0.17
GDF1P27539 AC022137.2-201ENST00000503482 481 ntBASIC13.98□□□□□ -0.17
GDF1P27539 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.98□□□□□ -0.17
GDF1P27539 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 AP005019.2-201ENST00000615104 511 ntBASIC13.98□□□□□ -0.17
GDF1P27539 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.98□□□□□ -0.17
GDF1P27539 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
GDF1P27539 PAUPAR-201ENST00000630360 2965 ntBASIC13.98□□□□□ -0.17
GDF1P27539 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.98□□□□□ -0.17
GDF1P27539 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GDF1P27539 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF1P27539 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF1P27539 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.97□□□□□ -0.17
GDF1P27539 AC022210.1-201ENST00000449856 793 ntBASIC13.97□□□□□ -0.17
GDF1P27539 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.97□□□□□ -0.17
GDF1P27539 AC106760.1-201ENST00000508690 800 ntBASIC13.97□□□□□ -0.17
GDF1P27539 AC104989.1-201ENST00000519711 778 ntBASIC13.97□□□□□ -0.17
GDF1P27539 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GDF1P27539 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.97□□□□□ -0.17
GDF1P27539 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 AC133552.6-201ENST00000613406 534 ntBASIC13.97□□□□□ -0.17
GDF1P27539 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF1P27539 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
GDF1P27539 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF1P27539 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.97□□□□□ -0.17
GDF1P27539 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.97□□□□□ -0.17
GDF1P27539 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
GDF1P27539 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.96□□□□□ -0.17
GDF1P27539 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.96□□□□□ -0.17
GDF1P27539 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GDF1P27539 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms