Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 AC123567.1-201ENST00000548294 1261 ntBASIC15.21■□□□□ 0.03
CDH3P22223 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH3P22223 AL596325.1-201ENST00000563991 1082 ntBASIC15.21■□□□□ 0.03
CDH3P22223 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH3P22223 AC239800.4-201ENST00000603712 296 ntBASIC15.21■□□□□ 0.03
CDH3P22223 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CDH3P22223 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH3P22223 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDH3P22223 AL035252.4-201ENST00000624174 288 ntBASIC15.21■□□□□ 0.03
CDH3P22223 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH3P22223 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH3P22223 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDH3P22223 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH3P22223 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH3P22223 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH3P22223 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH3P22223 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH3P22223 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH3P22223 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.21■□□□□ 0.02
CDH3P22223 MIR600HG-201ENST00000449175 5984 ntBASIC15.21■□□□□ 0.02
CDH3P22223 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CDH3P22223 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH3P22223 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CDH3P22223 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH3P22223 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH3P22223 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDH3P22223 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
CDH3P22223 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH3P22223 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
CDH3P22223 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH3P22223 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH3P22223 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH3P22223 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.2■□□□□ 0.02
CDH3P22223 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 SLED1-202ENST00000512051 380 ntBASIC15.2■□□□□ 0.02
CDH3P22223 AC104596.2-201ENST00000512793 793 ntBASIC15.2■□□□□ 0.02
CDH3P22223 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.2■□□□□ 0.02
CDH3P22223 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 RARRES2P5-201ENST00000564013 466 ntBASIC15.2■□□□□ 0.02
CDH3P22223 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.2■□□□□ 0.02
CDH3P22223 AC099568.2-201ENST00000609194 695 ntBASIC15.2■□□□□ 0.02
CDH3P22223 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDH3P22223 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH3P22223 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.2■□□□□ 0.02
CDH3P22223 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 CDC14C-201ENST00000428251 1719 ntBASIC15.2■□□□□ 0.02
CDH3P22223 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH3P22223 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH3P22223 AL607033.1-201ENST00000623900 1599 ntBASIC15.19■□□□□ 0.02
CDH3P22223 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 OR2I1P-210ENST00000642037 4691 ntBASIC15.19■□□□□ 0.02
CDH3P22223 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 LINC02447-202ENST00000501888 2146 ntBASIC15.19■□□□□ 0.02
CDH3P22223 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CDH3P22223 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.19■□□□□ 0.02
CDH3P22223 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDH3P22223 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDH3P22223 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms