Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC148477.9-201ENST00000623974 539 ntBASIC20.79■□□□□ 0.92
ATF3P18847 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ATF3P18847 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 AC006058.4-201ENST00000624016 1670 ntBASIC20.79■□□□□ 0.92
ATF3P18847 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
ATF3P18847 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATF3P18847 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.78■□□□□ 0.92
ATF3P18847 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ATF3P18847 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ATF3P18847 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.78■□□□□ 0.92
ATF3P18847 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ATF3P18847 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ATF3P18847 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ATF3P18847 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ATF3P18847 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC20.78■□□□□ 0.92
ATF3P18847 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.78■□□□□ 0.92
ATF3P18847 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.78■□□□□ 0.92
ATF3P18847 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC20.78■□□□□ 0.92
ATF3P18847 ALG1L6P-201ENST00000515248 758 ntBASIC20.78■□□□□ 0.92
ATF3P18847 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC20.78■□□□□ 0.92
ATF3P18847 AP001527.2-201ENST00000614441 631 ntBASIC20.78■□□□□ 0.92
ATF3P18847 AC105137.3-201ENST00000617588 984 ntBASIC20.78■□□□□ 0.92
ATF3P18847 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ATF3P18847 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATF3P18847 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.78■□□□□ 0.92
ATF3P18847 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.77■□□□□ 0.92
ATF3P18847 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ATF3P18847 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.77■□□□□ 0.92
ATF3P18847 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATF3P18847 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.77■□□□□ 0.92
ATF3P18847 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ATF3P18847 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATF3P18847 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATF3P18847 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ATF3P18847 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC20.77■□□□□ 0.92
ATF3P18847 LYPLA2P1-203ENST00000447689 696 ntBASIC20.77■□□□□ 0.92
ATF3P18847 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATF3P18847 NDUFS6P1-201ENST00000485187 316 ntBASIC20.77■□□□□ 0.92
ATF3P18847 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.77■□□□□ 0.92
ATF3P18847 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATF3P18847 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.77■□□□□ 0.92
ATF3P18847 AC093752.3-201ENST00000567343 901 ntBASIC20.77■□□□□ 0.92
ATF3P18847 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC20.77■□□□□ 0.92
ATF3P18847 MIR4522-201ENST00000584932 87 ntBASIC20.77■□□□□ 0.92
ATF3P18847 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ATF3P18847 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ATF3P18847 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.77■□□□□ 0.92
ATF3P18847 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.77■□□□□ 0.92
ATF3P18847 MIR6720-201ENST00000611664 98 ntBASIC20.77■□□□□ 0.92
ATF3P18847 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ATF3P18847 AC073911.3-201ENST00000624401 631 ntBASIC20.77■□□□□ 0.92
ATF3P18847 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATF3P18847 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATF3P18847 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ATF3P18847 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ATF3P18847 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ATF3P18847 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATF3P18847 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
ATF3P18847 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
ATF3P18847 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
ATF3P18847 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.76■□□□□ 0.91
ATF3P18847 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.76■□□□□ 0.91
ATF3P18847 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.76■□□□□ 0.91
ATF3P18847 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ATF3P18847 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.76■□□□□ 0.91
ATF3P18847 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.76■□□□□ 0.91
ATF3P18847 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.76■□□□□ 0.91
ATF3P18847 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATF3P18847 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.76■□□□□ 0.91
ATF3P18847 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.76■□□□□ 0.91
ATF3P18847 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ATF3P18847 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATF3P18847 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.76■□□□□ 0.91
ATF3P18847 RN7SL596P-201ENST00000582123 288 ntBASIC20.76■□□□□ 0.91
ATF3P18847 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATF3P18847 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms