Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AC012508.2-201ENST00000567613 1472 ntBASIC13.12□□□□□ -0.31
HIST1H1DP16402 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HSPA7-201ENST00000445535 1927 ntBASIC13.12□□□□□ -0.31
HIST1H1DP16402 LINC01230-201ENST00000625222 3017 ntBASIC13.12□□□□□ -0.31
HIST1H1DP16402 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 MED15P5-201ENST00000423150 992 ntBASIC13.12□□□□□ -0.31
HIST1H1DP16402 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HIST3H2BA-201ENST00000436555 524 ntBASIC13.12□□□□□ -0.31
HIST1H1DP16402 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 TIMM8BP1-201ENST00000452384 211 ntBASIC13.12□□□□□ -0.31
HIST1H1DP16402 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AC104581.4-201ENST00000623126 3052 ntBASIC13.12□□□□□ -0.31
HIST1H1DP16402 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
HIST1H1DP16402 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1DP16402 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC041040.2-201ENST00000622926 2899 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC006504.5-208ENST00000588784 2401 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms