Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 MIR770-201ENST00000390219 98 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 GNAQP1-201ENST00000444815 1067 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 INGX-202ENST00000489074 768 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 AC023310.3-201ENST00000557027 670 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 AC100756.1-201ENST00000562736 682 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 AC138749.3-201ENST00000567691 622 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 AC000095.1-201ENST00000603208 874 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 AC116165.1-201ENST00000611806 668 ntBASIC13.85□□□□□ -0.19
HLA-DOBP13765 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HLA-DOBP13765 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.85□□□□□ -0.19
HLA-DOBP13765 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 SPDYE19P-201ENST00000338590 713 ntBASIC13.84□□□□□ -0.19
HLA-DOBP13765 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 DOC2GP-202ENST00000514950 1163 ntBASIC13.84□□□□□ -0.19
HLA-DOBP13765 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DOBP13765 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DOBP13765 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DOBP13765 MROH4P-201ENST00000431302 1578 ntBASIC13.83□□□□□ -0.19
HLA-DOBP13765 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DOBP13765 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DOBP13765 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
HLA-DOBP13765 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DOBP13765 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms