Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MTHFD1P11586 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MTHFD1P11586 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
MTHFD1P11586 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MTHFD1P11586 RN7SL692P-201ENST00000464677 288 ntBASIC15.3■□□□□ 0.04
MTHFD1P11586 KRT18P43-201ENST00000469825 1281 ntBASIC15.3■□□□□ 0.04
MTHFD1P11586 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFD1P11586 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.3■□□□□ 0.04
MTHFD1P11586 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
MTHFD1P11586 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
MTHFD1P11586 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
MTHFD1P11586 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFD1P11586 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.3■□□□□ 0.04
MTHFD1P11586 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
MTHFD1P11586 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 AC092127.1-201ENST00000567093 3455 ntBASIC15.3■□□□□ 0.04
MTHFD1P11586 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MTHFD1P11586 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MTHFD1P11586 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MTHFD1P11586 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 CLK3P2-201ENST00000427566 1453 ntBASIC15.29■□□□□ 0.04
MTHFD1P11586 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.29■□□□□ 0.04
MTHFD1P11586 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 MYCLP2-201ENST00000449268 967 ntBASIC15.29■□□□□ 0.04
MTHFD1P11586 RN7SL399P-201ENST00000471648 279 ntBASIC15.29■□□□□ 0.04
MTHFD1P11586 AC104596.2-201ENST00000512793 793 ntBASIC15.29■□□□□ 0.04
MTHFD1P11586 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
MTHFD1P11586 WASH4P-201ENST00000564273 1246 ntBASIC15.29■□□□□ 0.04
MTHFD1P11586 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.29■□□□□ 0.04
MTHFD1P11586 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.29■□□□□ 0.04
MTHFD1P11586 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFD1P11586 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 AC090616.6-203ENST00000579186 1945 ntBASIC15.29■□□□□ 0.04
MTHFD1P11586 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MTHFD1P11586 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFD1P11586 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFD1P11586 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFD1P11586 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFD1P11586 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFD1P11586 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFD1P11586 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFD1P11586 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.28■□□□□ 0.04
MTHFD1P11586 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MTHFD1P11586 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFD1P11586 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms