Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.36□□□□□ -0.11
UBL4AP11441 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.36□□□□□ -0.11
UBL4AP11441 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 RFPL4AP1-201ENST00000530883 850 ntBASIC14.36□□□□□ -0.11
UBL4AP11441 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 LINC01115-203ENST00000606068 577 ntBASIC14.36□□□□□ -0.11
UBL4AP11441 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
UBL4AP11441 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 AP002414.2-201ENST00000591780 3365 ntBASIC14.36□□□□□ -0.11
UBL4AP11441 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
UBL4AP11441 C18orf15-201ENST00000623680 2534 ntBASIC14.36□□□□□ -0.11
UBL4AP11441 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
UBL4AP11441 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
UBL4AP11441 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.35□□□□□ -0.11
UBL4AP11441 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 TSSK5P-201ENST00000423978 907 ntBASIC14.35□□□□□ -0.11
UBL4AP11441 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.35□□□□□ -0.11
UBL4AP11441 KRT18P64-201ENST00000434946 1219 ntBASIC14.35□□□□□ -0.11
UBL4AP11441 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.35□□□□□ -0.11
UBL4AP11441 AL512638.1-201ENST00000457493 794 ntBASIC14.35□□□□□ -0.11
UBL4AP11441 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.35□□□□□ -0.11
UBL4AP11441 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.35□□□□□ -0.11
UBL4AP11441 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 AF228730.6-201ENST00000641497 218 ntBASIC14.35□□□□□ -0.11
UBL4AP11441 AC084121.3-201ENST00000641716 218 ntBASIC14.35□□□□□ -0.11
UBL4AP11441 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
UBL4AP11441 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
UBL4AP11441 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBL4AP11441 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 AC112693.3-201ENST00000624819 1983 ntBASIC14.34□□□□□ -0.11
UBL4AP11441 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
UBL4AP11441 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBL4AP11441 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.34□□□□□ -0.11
UBL4AP11441 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms