Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.46■□□□□ 0.07
MMP2P08253 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP2P08253 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
MMP2P08253 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 RNU1-114P-201ENST00000365297 166 ntBASIC15.46■□□□□ 0.07
MMP2P08253 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP2P08253 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.46■□□□□ 0.07
MMP2P08253 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.46■□□□□ 0.07
MMP2P08253 ENPP7P5-201ENST00000541031 1031 ntBASIC15.46■□□□□ 0.07
MMP2P08253 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.46■□□□□ 0.07
MMP2P08253 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.46■□□□□ 0.07
MMP2P08253 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.46■□□□□ 0.07
MMP2P08253 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.46■□□□□ 0.07
MMP2P08253 CU634019.7-201ENST00000624153 1185 ntBASIC15.46■□□□□ 0.07
MMP2P08253 FP236241.2-201ENST00000624906 1185 ntBASIC15.46■□□□□ 0.07
MMP2P08253 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.46■□□□□ 0.07
MMP2P08253 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP2P08253 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.46■□□□□ 0.07
MMP2P08253 LILRP1-201ENST00000444199 1370 ntBASIC15.46■□□□□ 0.07
MMP2P08253 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
MMP2P08253 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
MMP2P08253 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MMP2P08253 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MMP2P08253 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MMP2P08253 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
MMP2P08253 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP2P08253 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP2P08253 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 AL162726.2-201ENST00000438986 1017 ntBASIC15.45■□□□□ 0.06
MMP2P08253 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MMP2P08253 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.45■□□□□ 0.06
MMP2P08253 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.45■□□□□ 0.06
MMP2P08253 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP2P08253 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP2P08253 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP2P08253 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.45■□□□□ 0.06
MMP2P08253 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.45■□□□□ 0.06
MMP2P08253 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
MMP2P08253 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MMP2P08253 CICP24-201ENST00000605464 2705 ntBASIC15.45■□□□□ 0.06
MMP2P08253 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
MMP2P08253 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.44■□□□□ 0.06
MMP2P08253 MSTO2P-201ENST00000314835 1709 ntBASIC15.44■□□□□ 0.06
MMP2P08253 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.44■□□□□ 0.06
MMP2P08253 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
MMP2P08253 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms