Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CAPN1P07384 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN1P07384 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN1P07384 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN1P07384 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 BTBD7P1-201ENST00000447253 1453 ntBASIC15.26■□□□□ 0.03
CAPN1P07384 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN1P07384 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CAPN1P07384 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN1P07384 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN1P07384 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN1P07384 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.25■□□□□ 0.03
CAPN1P07384 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN1P07384 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN1P07384 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CAPN1P07384 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CAPN1P07384 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CAPN1P07384 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN1P07384 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN1P07384 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.25■□□□□ 0.03
CAPN1P07384 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.25■□□□□ 0.03
CAPN1P07384 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.25■□□□□ 0.03
CAPN1P07384 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN1P07384 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.25■□□□□ 0.03
CAPN1P07384 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN1P07384 AC004790.1-201ENST00000612686 536 ntBASIC15.25■□□□□ 0.03
CAPN1P07384 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN1P07384 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 AC148477.4-201ENST00000613430 1793 ntBASIC15.25■□□□□ 0.03
CAPN1P07384 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN1P07384 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.25■□□□□ 0.03
CAPN1P07384 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CAPN1P07384 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.25■□□□□ 0.03
CAPN1P07384 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN1P07384 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.24■□□□□ 0.03
CAPN1P07384 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN1P07384 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN1P07384 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.24■□□□□ 0.03
CAPN1P07384 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.24■□□□□ 0.03
CAPN1P07384 RN7SL618P-201ENST00000477850 296 ntBASIC15.24■□□□□ 0.03
CAPN1P07384 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 AC135586.1-201ENST00000539323 574 ntBASIC15.24■□□□□ 0.03
CAPN1P07384 AC044860.1-202ENST00000559481 777 ntBASIC15.24■□□□□ 0.03
CAPN1P07384 AL596325.1-201ENST00000563991 1082 ntBASIC15.24■□□□□ 0.03
CAPN1P07384 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.24■□□□□ 0.03
CAPN1P07384 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CAPN1P07384 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms