Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.27■□□□□ 0.03
PDGFBP01127 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDGFBP01127 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFBP01127 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 AL592076.1-201ENST00000424448 303 ntBASIC15.26■□□□□ 0.03
PDGFBP01127 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFBP01127 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 MIR5196-201ENST00000578146 115 ntBASIC15.26■□□□□ 0.03
PDGFBP01127 MIR4522-201ENST00000584932 87 ntBASIC15.26■□□□□ 0.03
PDGFBP01127 EIF5AP2-201ENST00000585668 1047 ntBASIC15.26■□□□□ 0.03
PDGFBP01127 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFBP01127 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 LINC00431-202ENST00000636375 159 ntBASIC15.26■□□□□ 0.03
PDGFBP01127 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PDGFBP01127 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
PDGFBP01127 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFBP01127 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 AC244394.1-201ENST00000435000 1665 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.25■□□□□ 0.03
PDGFBP01127 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 NDUFS6P1-201ENST00000485187 316 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 AC026434.2-201ENST00000506094 1078 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 ALG1L6P-201ENST00000515248 758 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.25■□□□□ 0.03
PDGFBP01127 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 AC005962.1-201ENST00000584100 773 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.25■□□□□ 0.03
PDGFBP01127 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 AC107464.3-201ENST00000609172 737 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 AC006158.1-201ENST00000610661 249 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 AC006449.6-201ENST00000612330 2296 ntBASIC15.25■□□□□ 0.03
PDGFBP01127 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
PDGFBP01127 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDGFBP01127 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFBP01127 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms