Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.32■□□□□ 0.52
MBD4O95243 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MBD4O95243 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.32■□□□□ 0.52
MBD4O95243 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
MBD4O95243 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.31■□□□□ 0.52
MBD4O95243 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MBD4O95243 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.31■□□□□ 0.52
MBD4O95243 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
MBD4O95243 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.31■□□□□ 0.52
MBD4O95243 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 COX11-210ENST00000639671 696 ntBASIC18.31■□□□□ 0.52
MBD4O95243 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 LRRC59-203ENST00000576448 1531 ntBASIC18.31■□□□□ 0.52
MBD4O95243 AC126365.1-201ENST00000578585 1514 ntBASIC18.31■□□□□ 0.52
MBD4O95243 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.31■□□□□ 0.52
MBD4O95243 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MBD4O95243 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.31■□□□□ 0.52
MBD4O95243 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.31■□□□□ 0.52
MBD4O95243 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MBD4O95243 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 AL162727.3-201ENST00000635661 2787 ntBASIC18.3■□□□□ 0.52
MBD4O95243 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 CICP6-201ENST00000457191 2729 ntBASIC18.3■□□□□ 0.52
MBD4O95243 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 AL360270.3-201ENST00000609118 1348 ntBASIC18.3■□□□□ 0.52
MBD4O95243 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 AC138035.3-201ENST00000622706 2791 ntBASIC18.3■□□□□ 0.52
MBD4O95243 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 C2orf27AP3-201ENST00000434123 579 ntBASIC18.3■□□□□ 0.52
MBD4O95243 EIF3FP3-201ENST00000434851 1086 ntBASIC18.3■□□□□ 0.52
MBD4O95243 RPL7P3-201ENST00000441388 714 ntBASIC18.3■□□□□ 0.52
MBD4O95243 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.3■□□□□ 0.52
MBD4O95243 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.3■□□□□ 0.52
MBD4O95243 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.3■□□□□ 0.52
MBD4O95243 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.3■□□□□ 0.52
MBD4O95243 AL354718.3-201ENST00000616414 581 ntBASIC18.3■□□□□ 0.52
MBD4O95243 CR382287.1-201ENST00000623954 586 ntBASIC18.3■□□□□ 0.52
MBD4O95243 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MBD4O95243 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MBD4O95243 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms