Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 AL591846.1-201ENST00000451736 433 ntBASIC16.59■□□□□ 0.25
CSPG5O95196 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 EIF4HP1-201ENST00000453115 687 ntBASIC16.59■□□□□ 0.25
CSPG5O95196 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.59■□□□□ 0.25
CSPG5O95196 AL096828.3-201ENST00000615354 462 ntBASIC16.59■□□□□ 0.25
CSPG5O95196 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.59■□□□□ 0.25
CSPG5O95196 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSPG5O95196 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.59■□□□□ 0.25
CSPG5O95196 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG5O95196 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG5O95196 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG5O95196 AC126755.1-201ENST00000525846 6405 ntBASIC16.58■□□□□ 0.25
CSPG5O95196 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG5O95196 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CSPG5O95196 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG5O95196 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CSPG5O95196 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG5O95196 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSPG5O95196 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.58■□□□□ 0.24
CSPG5O95196 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.58■□□□□ 0.24
CSPG5O95196 RPSAP36-202ENST00000494591 1261 ntBASIC16.58■□□□□ 0.24
CSPG5O95196 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CSPG5O95196 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CSPG5O95196 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CSPG5O95196 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 AC000095.1-201ENST00000603208 874 ntBASIC16.58■□□□□ 0.24
CSPG5O95196 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.58■□□□□ 0.24
CSPG5O95196 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.58■□□□□ 0.24
CSPG5O95196 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.58■□□□□ 0.24
CSPG5O95196 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CSPG5O95196 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.58■□□□□ 0.24
CSPG5O95196 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CSPG5O95196 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSPG5O95196 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG5O95196 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG5O95196 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CSPG5O95196 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG5O95196 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG5O95196 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG5O95196 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CSPG5O95196 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG5O95196 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG5O95196 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG5O95196 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.57■□□□□ 0.24
CSPG5O95196 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.57■□□□□ 0.24
CSPG5O95196 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG5O95196 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.57■□□□□ 0.24
CSPG5O95196 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSPG5O95196 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms