Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 TFAMP1-201ENST00000412727 736 ntBASIC13.66□□□□□ -0.22
KDM4BO94953 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 AL671277.1-201ENST00000429656 993 ntBASIC13.66□□□□□ -0.22
KDM4BO94953 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.66□□□□□ -0.22
KDM4BO94953 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.66□□□□□ -0.22
KDM4BO94953 FAM86C2P-203ENST00000528684 1004 ntBASIC13.66□□□□□ -0.22
KDM4BO94953 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.66□□□□□ -0.22
KDM4BO94953 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.66□□□□□ -0.22
KDM4BO94953 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.66□□□□□ -0.22
KDM4BO94953 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.66□□□□□ -0.22
KDM4BO94953 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.66□□□□□ -0.22
KDM4BO94953 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
KDM4BO94953 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.66□□□□□ -0.22
KDM4BO94953 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KDM4BO94953 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.66□□□□□ -0.22
KDM4BO94953 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.66□□□□□ -0.22
KDM4BO94953 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.66□□□□□ -0.22
KDM4BO94953 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.66□□□□□ -0.22
KDM4BO94953 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
KDM4BO94953 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
KDM4BO94953 AC010327.5-201ENST00000586923 3061 ntBASIC13.65□□□□□ -0.22
KDM4BO94953 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.65□□□□□ -0.22
KDM4BO94953 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.65□□□□□ -0.22
KDM4BO94953 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.65□□□□□ -0.22
KDM4BO94953 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
KDM4BO94953 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
KDM4BO94953 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
KDM4BO94953 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
KDM4BO94953 RN7SL589P-201ENST00000481268 310 ntBASIC13.65□□□□□ -0.22
KDM4BO94953 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.65□□□□□ -0.22
KDM4BO94953 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.65□□□□□ -0.22
KDM4BO94953 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.65□□□□□ -0.22
KDM4BO94953 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.65□□□□□ -0.22
KDM4BO94953 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.65□□□□□ -0.22
KDM4BO94953 AC027307.2-201ENST00000591252 911 ntBASIC13.65□□□□□ -0.22
KDM4BO94953 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.65□□□□□ -0.22
KDM4BO94953 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
KDM4BO94953 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.65□□□□□ -0.22
KDM4BO94953 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
KDM4BO94953 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.65□□□□□ -0.22
KDM4BO94953 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
KDM4BO94953 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.65□□□□□ -0.22
KDM4BO94953 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 AC023024.2-201ENST00000623561 1993 ntBASIC13.65□□□□□ -0.22
KDM4BO94953 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
KDM4BO94953 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.65□□□□□ -0.22
KDM4BO94953 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
KDM4BO94953 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
KDM4BO94953 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KDM4BO94953 AL122018.1-201ENST00000446607 2310 ntBASIC13.64□□□□□ -0.23
KDM4BO94953 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.64□□□□□ -0.23
KDM4BO94953 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KDM4BO94953 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms