Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC241585.1-201ENST00000433527 519 ntBASIC15.51■□□□□ 0.07
RFPL1O75677 CRB3P1-201ENST00000449338 276 ntBASIC15.51■□□□□ 0.07
RFPL1O75677 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.51■□□□□ 0.07
RFPL1O75677 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.51■□□□□ 0.07
RFPL1O75677 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.51■□□□□ 0.07
RFPL1O75677 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.51■□□□□ 0.07
RFPL1O75677 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.51■□□□□ 0.07
RFPL1O75677 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RFPL1O75677 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.51■□□□□ 0.07
RFPL1O75677 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFPL1O75677 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RFPL1O75677 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFPL1O75677 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.51■□□□□ 0.07
RFPL1O75677 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RFPL1O75677 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.5■□□□□ 0.07
RFPL1O75677 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.5■□□□□ 0.07
RFPL1O75677 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.5■□□□□ 0.07
RFPL1O75677 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.5■□□□□ 0.07
RFPL1O75677 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.5■□□□□ 0.07
RFPL1O75677 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.5■□□□□ 0.07
RFPL1O75677 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.5■□□□□ 0.07
RFPL1O75677 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.5■□□□□ 0.07
RFPL1O75677 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.5■□□□□ 0.07
RFPL1O75677 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.5■□□□□ 0.07
RFPL1O75677 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.5■□□□□ 0.07
RFPL1O75677 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RFPL1O75677 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.5■□□□□ 0.07
RFPL1O75677 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.5■□□□□ 0.07
RFPL1O75677 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFPL1O75677 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.49■□□□□ 0.07
RFPL1O75677 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RFPL1O75677 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
RFPL1O75677 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.49■□□□□ 0.07
RFPL1O75677 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 MTHFR-210ENST00000641407 2387 ntBASIC15.49■□□□□ 0.07
RFPL1O75677 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.49■□□□□ 0.07
RFPL1O75677 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.49■□□□□ 0.07
RFPL1O75677 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.49■□□□□ 0.07
RFPL1O75677 AC092580.3-201ENST00000430932 139 ntBASIC15.49■□□□□ 0.07
RFPL1O75677 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.49■□□□□ 0.07
RFPL1O75677 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.49■□□□□ 0.07
RFPL1O75677 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.49■□□□□ 0.07
RFPL1O75677 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.49■□□□□ 0.07
RFPL1O75677 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.49■□□□□ 0.07
RFPL1O75677 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.49■□□□□ 0.07
RFPL1O75677 MIR4453-201ENST00000584019 89 ntBASIC15.49■□□□□ 0.07
RFPL1O75677 AC009118.2-201ENST00000613275 655 ntBASIC15.49■□□□□ 0.07
RFPL1O75677 AC073592.8-201ENST00000624126 511 ntBASIC15.49■□□□□ 0.07
RFPL1O75677 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.49■□□□□ 0.07
RFPL1O75677 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.49■□□□□ 0.07
RFPL1O75677 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.49■□□□□ 0.07
RFPL1O75677 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFPL1O75677 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms