Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GPC4O75487 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GPC4O75487 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
GPC4O75487 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GPC4O75487 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
GPC4O75487 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.55■□□□□ 0.08
GPC4O75487 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.55■□□□□ 0.08
GPC4O75487 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GPC4O75487 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GPC4O75487 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.55■□□□□ 0.08
GPC4O75487 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GPC4O75487 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GPC4O75487 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
GPC4O75487 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
GPC4O75487 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.54■□□□□ 0.08
GPC4O75487 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.54■□□□□ 0.08
GPC4O75487 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.54■□□□□ 0.08
GPC4O75487 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.54■□□□□ 0.08
GPC4O75487 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.54■□□□□ 0.08
GPC4O75487 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.54■□□□□ 0.08
GPC4O75487 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.54■□□□□ 0.08
GPC4O75487 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.54■□□□□ 0.08
GPC4O75487 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.54■□□□□ 0.08
GPC4O75487 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
GPC4O75487 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GPC4O75487 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GPC4O75487 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.54■□□□□ 0.08
GPC4O75487 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.53■□□□□ 0.08
GPC4O75487 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.53■□□□□ 0.08
GPC4O75487 AC074338.1-201ENST00000416825 156 ntBASIC15.53■□□□□ 0.08
GPC4O75487 AC009477.1-201ENST00000452936 217 ntBASIC15.53■□□□□ 0.08
GPC4O75487 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.53■□□□□ 0.08
GPC4O75487 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 IGHV3-42-201ENST00000520410 361 ntBASIC15.53■□□□□ 0.08
GPC4O75487 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 AC027796.2-201ENST00000575326 344 ntBASIC15.53■□□□□ 0.08
GPC4O75487 AC005498.2-205ENST00000593218 784 ntBASIC15.53■□□□□ 0.08
GPC4O75487 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GPC4O75487 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
GPC4O75487 AL009178.2-201ENST00000597278 2719 ntBASIC15.53■□□□□ 0.08
GPC4O75487 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
GPC4O75487 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GPC4O75487 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms