Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 REXO1L5P-201ENST00000622260 2098 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 AL359258.3-201ENST00000622910 2331 ntBASIC13.82□□□□□ -0.2
ZIC3O60481 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.82□□□□□ -0.2
ZIC3O60481 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 KRT8P14-201ENST00000414254 1442 ntBASIC13.82□□□□□ -0.2
ZIC3O60481 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.82□□□□□ -0.2
ZIC3O60481 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
ZIC3O60481 HLA-K-203ENST00000430151 1046 ntBASIC13.82□□□□□ -0.2
ZIC3O60481 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.82□□□□□ -0.2
ZIC3O60481 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ZIC3O60481 GNRHR2-203ENST00000581100 1187 ntBASIC13.82□□□□□ -0.2
ZIC3O60481 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.82□□□□□ -0.2
ZIC3O60481 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 MROH4P-201ENST00000431302 1578 ntBASIC13.82□□□□□ -0.2
ZIC3O60481 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ZIC3O60481 AL109954.1-202ENST00000564051 2148 ntBASIC13.82□□□□□ -0.2
ZIC3O60481 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ZIC3O60481 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
ZIC3O60481 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC3O60481 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC3O60481 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 AC092384.3-202ENST00000564646 2873 ntBASIC13.81□□□□□ -0.2
ZIC3O60481 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 MIR1909-201ENST00000411312 80 ntBASIC13.81□□□□□ -0.2
ZIC3O60481 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.81□□□□□ -0.2
ZIC3O60481 AC007551.1-201ENST00000457394 519 ntBASIC13.81□□□□□ -0.2
ZIC3O60481 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.81□□□□□ -0.2
ZIC3O60481 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.81□□□□□ -0.2
ZIC3O60481 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.81□□□□□ -0.2
ZIC3O60481 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 AC046158.3-201ENST00000624947 2558 ntBASIC13.81□□□□□ -0.2
ZIC3O60481 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 AL157414.3-201ENST00000624276 1954 ntBASIC13.81□□□□□ -0.2
ZIC3O60481 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 AL138709.1-201ENST00000614840 1693 ntBASIC13.81□□□□□ -0.2
ZIC3O60481 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC3O60481 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC3O60481 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC3O60481 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms