Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF13O43567 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF13O43567 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF13O43567 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RNF13O43567 AL080243.2-201ENST00000418783 582 ntBASIC14.11□□□□□ -0.15
RNF13O43567 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF13O43567 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 TARDBPP1-201ENST00000442013 1203 ntBASIC14.11□□□□□ -0.15
RNF13O43567 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RNF13O43567 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 AC023511.2-201ENST00000618803 211 ntBASIC14.11□□□□□ -0.15
RNF13O43567 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF13O43567 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF13O43567 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 AC148477.4-201ENST00000613430 1793 ntBASIC14.11□□□□□ -0.15
RNF13O43567 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RNF13O43567 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF13O43567 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF13O43567 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 FO538757.1-201ENST00000623083 1397 ntBASIC14.1□□□□□ -0.15
RNF13O43567 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF13O43567 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 AL139400.1-201ENST00000366220 510 ntBASIC14.1□□□□□ -0.15
RNF13O43567 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 RPL37AP1-201ENST00000412502 279 ntBASIC14.1□□□□□ -0.15
RNF13O43567 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.1□□□□□ -0.15
RNF13O43567 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.1□□□□□ -0.15
RNF13O43567 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF13O43567 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 AL033527.5-202ENST00000641632 1098 ntBASIC14.1□□□□□ -0.15
RNF13O43567 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF13O43567 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RNF13O43567 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RNF13O43567 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF13O43567 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RNF13O43567 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF13O43567 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF13O43567 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.09□□□□□ -0.15
RNF13O43567 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.09□□□□□ -0.15
RNF13O43567 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RNF13O43567 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF13O43567 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF13O43567 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF13O43567 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RNF13O43567 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF13O43567 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms