Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NDUFA1O15239 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
NDUFA1O15239 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NDUFA1O15239 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC10.62□□□□□ -0.71
NDUFA1O15239 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
NDUFA1O15239 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.61□□□□□ -0.71
NDUFA1O15239 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 DMBT1P1-203ENST00000636837 4628 ntBASIC10.61□□□□□ -0.71
NDUFA1O15239 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
NDUFA1O15239 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
NDUFA1O15239 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.61□□□□□ -0.71
NDUFA1O15239 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.61□□□□□ -0.71
NDUFA1O15239 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.61□□□□□ -0.71
NDUFA1O15239 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 AC104692.2-201ENST00000603054 253 ntBASIC10.61□□□□□ -0.71
NDUFA1O15239 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 ACE3P-201ENST00000423435 1973 ntBASIC10.61□□□□□ -0.71
NDUFA1O15239 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
NDUFA1O15239 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC10.61□□□□□ -0.71
NDUFA1O15239 AC092135.3-201ENST00000624151 1846 ntBASIC10.61□□□□□ -0.71
NDUFA1O15239 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.61□□□□□ -0.71
NDUFA1O15239 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
NDUFA1O15239 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 AC104109.2-201ENST00000602919 1418 ntBASIC10.6□□□□□ -0.71
NDUFA1O15239 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.6□□□□□ -0.71
NDUFA1O15239 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
NDUFA1O15239 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
NDUFA1O15239 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
NDUFA1O15239 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms