Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 HERC2P11-201ENST00000562845 725 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC100756.2-201ENST00000569537 736 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 CYP4F36P-201ENST00000589193 186 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 AL136172.1-201ENST00000598590 1394 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.82■□□□□ 0.6
RGPD3A6NKT7 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.82■□□□□ 0.6
RGPD3A6NKT7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 TNRC18P3-201ENST00000441896 2691 ntBASIC18.81■□□□□ 0.6
RGPD3A6NKT7 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 MIR566-201ENST00000385187 94 ntBASIC18.81■□□□□ 0.6
RGPD3A6NKT7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.81■□□□□ 0.6
RGPD3A6NKT7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 AC003686.1-201ENST00000550956 1034 ntBASIC18.81■□□□□ 0.6
RGPD3A6NKT7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 AC020904.3-201ENST00000624199 442 ntBASIC18.81■□□□□ 0.6
RGPD3A6NKT7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 ALG1L3P-201ENST00000503331 765 ntBASIC18.81■□□□□ 0.6
RGPD3A6NKT7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.81■□□□□ 0.6
RGPD3A6NKT7 AC090510.3-201ENST00000615831 821 ntBASIC18.81■□□□□ 0.6
RGPD3A6NKT7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 GNG10P1-201ENST00000452289 199 ntBASIC18.8■□□□□ 0.6
RGPD3A6NKT7 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 AC011462.4-201ENST00000616866 449 ntBASIC18.8■□□□□ 0.6
RGPD3A6NKT7 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RGPD3A6NKT7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RGPD3A6NKT7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms