Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 AC239868.1-201ENST00000369385 493 ntBASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 AL627231.1-201ENST00000394467 1125 ntBASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 LBH-202ENST00000401506 485 ntTSL 3 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 Z98259.2-201ENST00000641583 609 ntBASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 NKILA-202ENST00000614771 2598 ntBASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PLEKHD1A6NEE1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AC006058.4-201ENST00000624016 1670 ntBASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AC009090.5-201ENST00000624886 2285 ntBASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AC078991.1-201ENST00000437297 610 ntBASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AC114501.1-201ENST00000445949 172 ntBASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AP003680.1-201ENST00000598970 3660 ntBASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 AL138725.1-201ENST00000407347 1314 ntBASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC23.29■■□□□ 1.32
PLEKHD1A6NEE1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 SLC9A7P1-202ENST00000556476 2239 ntBASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 SUPT20HL2-201ENST00000486479 2409 ntBASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 RN7SL258P-201ENST00000478664 300 ntBASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 AC135983.4-201ENST00000564116 1262 ntBASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 HLA-C-210ENST00000640219 976 ntBASIC23.28■■□□□ 1.32
PLEKHD1A6NEE1 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms