Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 MIR663B-201ENST00000408361 115 ntBASIC13.43□□□□□ -0.26
MBD3L3A6NE82 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AP003171.2-201ENST00000528208 925 ntBASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AP001258.2-201ENST00000529891 490 ntBASIC13.43□□□□□ -0.26
MBD3L3A6NE82 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AC104982.3-201ENST00000581995 514 ntBASIC13.43□□□□□ -0.26
MBD3L3A6NE82 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AL096828.3-201ENST00000615354 462 ntBASIC13.43□□□□□ -0.26
MBD3L3A6NE82 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.43□□□□□ -0.26
MBD3L3A6NE82 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC011270.2-201ENST00000624293 2550 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AL157414.3-201ENST00000624276 1954 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AL136309.1-201ENST00000403917 691 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 POM121L10P-201ENST00000436994 1285 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC004898.1-201ENST00000451057 766 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC026434.2-201ENST00000506094 1078 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 ZNF767P-206ENST00000513792 565 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 MIR3615-201ENST00000581999 87 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC004466.1-201ENST00000599515 1080 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 MST1L-201ENST00000442552 2185 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 AC087481.3-201ENST00000602886 1894 ntBASIC13.42□□□□□ -0.26
MBD3L3A6NE82 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MBD3L3A6NE82 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MBD3L3A6NE82 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms