Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HIST3H2BA-201ENST00000436555 524 ntBASIC13.45□□□□□ -0.26
SHISA3A0PJX4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC079781.3-201ENST00000449110 356 ntBASIC13.45□□□□□ -0.26
SHISA3A0PJX4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 AC007787.1-201ENST00000588095 1583 ntBASIC13.45□□□□□ -0.26
SHISA3A0PJX4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SHISA3A0PJX4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 PPT1-213ENST00000641319 2388 ntBASIC13.44□□□□□ -0.26
SHISA3A0PJX4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AC104457.1-201ENST00000401024 814 ntBASIC13.44□□□□□ -0.26
SHISA3A0PJX4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AL031284.1-201ENST00000419297 478 ntBASIC13.44□□□□□ -0.26
SHISA3A0PJX4 TPT1P11-201ENST00000458482 498 ntBASIC13.44□□□□□ -0.26
SHISA3A0PJX4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AL135744.1-201ENST00000565098 629 ntBASIC13.44□□□□□ -0.26
SHISA3A0PJX4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHISA3A0PJX4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHISA3A0PJX4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms