Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 CICP11-201ENST00000434745 2827 ntBASIC15.99■□□□□ 0.15
YIPF1Q9Y548 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 BCYRN1-201ENST00000418539 200 ntBASIC15.99■□□□□ 0.15
YIPF1Q9Y548 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 KRT8P13-201ENST00000463294 1010 ntBASIC15.99■□□□□ 0.15
YIPF1Q9Y548 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 AC104982.3-201ENST00000581995 514 ntBASIC15.99■□□□□ 0.15
YIPF1Q9Y548 PPY2P-201ENST00000582808 702 ntBASIC15.99■□□□□ 0.15
YIPF1Q9Y548 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 AL606495.2-201ENST00000605867 535 ntBASIC15.99■□□□□ 0.15
YIPF1Q9Y548 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
YIPF1Q9Y548 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AC090616.6-203ENST00000579186 1945 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AC079178.1-201ENST00000420915 656 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 GHSR-202ENST00000427970 912 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AL391280.1-201ENST00000506969 1062 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AP001258.2-201ENST00000529891 490 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 DUX4L47-201ENST00000566374 394 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 RN7SL713P-201ENST00000582127 302 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AC004466.1-201ENST00000599515 1080 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AC073413.1-201ENST00000603927 732 ntBASIC15.98■□□□□ 0.15
YIPF1Q9Y548 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
YIPF1Q9Y548 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
YIPF1Q9Y548 AL157414.3-201ENST00000624276 1954 ntBASIC15.97■□□□□ 0.15
YIPF1Q9Y548 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms