Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 AC005252.2-201ENST00000624630 1141 ntBASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 PAUPAR-201ENST00000630360 2965 ntBASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX2IPQ9Y2D8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AC011477.6-201ENST00000604980 1927 ntBASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AC022137.2-201ENST00000503482 481 ntBASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 RHOXF1P1-202ENST00000635473 501 ntBASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX2IPQ9Y2D8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SSX2IPQ9Y2D8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.64■□□□□ 0.26
SSX2IPQ9Y2D8 ALOX12P2-203ENST00000570921 1945 ntBASIC16.64■□□□□ 0.26
SSX2IPQ9Y2D8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSX2IPQ9Y2D8 AC104640.1-201ENST00000562617 2109 ntBASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 DRD5P1-201ENST00000456605 1438 ntBASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 PFN1P12-201ENST00000455938 534 ntBASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 MIR6869-201ENST00000619434 62 ntBASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SSX2IPQ9Y2D8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms