Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.65■□□□□ 0.9
PHF8Q9UPP1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PHF8Q9UPP1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 AP003680.1-201ENST00000598970 3660 ntBASIC20.64■□□□□ 0.9
PHF8Q9UPP1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PHF8Q9UPP1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 RN7SKP230-201ENST00000365642 335 ntBASIC20.64■□□□□ 0.89
PHF8Q9UPP1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 AC114501.1-201ENST00000445949 172 ntBASIC20.64■□□□□ 0.89
PHF8Q9UPP1 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 AC087045.2-201ENST00000606279 1003 ntBASIC20.64■□□□□ 0.89
PHF8Q9UPP1 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC20.64■□□□□ 0.89
PHF8Q9UPP1 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 AL008718.2-201ENST00000609206 1313 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 AC012441.2-201ENST00000444843 739 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 SCARNA21-201ENST00000517026 139 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 AC135983.4-201ENST00000564116 1262 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 AC092171.5-201ENST00000608012 942 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 HLA-C-210ENST00000640219 976 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 PCDHA14-201ENST00000506751 2298 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 AC009090.5-201ENST00000624886 2285 ntBASIC20.63■□□□□ 0.89
PHF8Q9UPP1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PHF8Q9UPP1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 AL137783.1-201ENST00000623494 1896 ntBASIC20.62■□□□□ 0.89
PHF8Q9UPP1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PHF8Q9UPP1 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms