Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLCF1Q9UBD9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CLCF1Q9UBD9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLCF1Q9UBD9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AC105250.1-201ENST00000509378 2057 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AL645937.2-201ENST00000396808 931 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 KLF2P2-201ENST00000416807 1039 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AC099336.1-201ENST00000417053 1171 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 BNIP3P42-201ENST00000454982 569 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 BNIP3P29-201ENST00000598302 571 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AC011447.5-201ENST00000616168 564 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AC007787.1-201ENST00000588095 1583 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 AC008741.2-201ENST00000612792 3115 ntBASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLCF1Q9UBD9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 AC114812.1-204ENST00000449669 728 ntBASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CLCF1Q9UBD9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms