Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 FAM197Y7-201ENST00000432892 766 ntBASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 C2orf27AP3-201ENST00000434123 579 ntBASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 AL354718.3-201ENST00000616414 581 ntBASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 CR382287.1-201ENST00000623954 586 ntBASIC13.62□□□□□ -0.23
KIAA1549Q9HCM3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 WASH3P-207ENST00000560956 1394 ntBASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 BCYRN1-201ENST00000418539 200 ntBASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 FAM8A2P-201ENST00000528813 1142 ntBASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AC009486.1-201ENST00000569860 813 ntBASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AC073413.1-201ENST00000603927 732 ntBASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 AC005695.3-201ENST00000614522 232 ntBASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
KIAA1549Q9HCM3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 MTX1P1-201ENST00000440904 838 ntBASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 C2orf69P2-201ENST00000562032 1123 ntBASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KIAA1549Q9HCM3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms