Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.77□□□□□ -0.05
BRF2Q9HAW0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 AC004066.1-201ENST00000502488 802 ntBASIC14.76□□□□□ -0.05
BRF2Q9HAW0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.76□□□□□ -0.05
BRF2Q9HAW0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 GAPDHP40-201ENST00000505218 1006 ntBASIC14.75□□□□□ -0.05
BRF2Q9HAW0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AC008738.7-201ENST00000609744 511 ntBASIC14.75□□□□□ -0.05
BRF2Q9HAW0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AC004840.1-201ENST00000636359 365 ntBASIC14.75□□□□□ -0.05
BRF2Q9HAW0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AC007292.2-201ENST00000593524 1812 ntBASIC14.75□□□□□ -0.05
BRF2Q9HAW0 AL513477.1-201ENST00000602865 2407 ntBASIC14.75□□□□□ -0.05
BRF2Q9HAW0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.75□□□□□ -0.05
BRF2Q9HAW0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms