Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.86□□□□□ -0.03
PIF1Q9H611 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PIF1Q9H611 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PIF1Q9H611 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.85□□□□□ -0.03
PIF1Q9H611 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 MTDHP5-201ENST00000598980 586 ntBASIC14.85□□□□□ -0.03
PIF1Q9H611 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.85□□□□□ -0.03
PIF1Q9H611 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.85□□□□□ -0.03
PIF1Q9H611 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIF1Q9H611 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
PIF1Q9H611 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.84□□□□□ -0.03
PIF1Q9H611 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.84□□□□□ -0.03
PIF1Q9H611 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.84□□□□□ -0.03
PIF1Q9H611 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.84□□□□□ -0.03
PIF1Q9H611 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.84□□□□□ -0.03
PIF1Q9H611 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.84□□□□□ -0.03
PIF1Q9H611 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
PIF1Q9H611 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 AL135744.1-201ENST00000565098 629 ntBASIC14.84□□□□□ -0.03
PIF1Q9H611 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.84□□□□□ -0.03
PIF1Q9H611 AL671883.3-201ENST00000603274 991 ntBASIC14.84□□□□□ -0.03
PIF1Q9H611 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.84□□□□□ -0.03
PIF1Q9H611 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PIF1Q9H611 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.84□□□□□ -0.03
PIF1Q9H611 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PIF1Q9H611 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PIF1Q9H611 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PIF1Q9H611 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIF1Q9H611 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.83□□□□□ -0.03
PIF1Q9H611 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PIF1Q9H611 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PIF1Q9H611 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PIF1Q9H611 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIF1Q9H611 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms