Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 FLJ38576-201ENST00000623820 2459 ntBASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 PSMD4P1-201ENST00000433951 1109 ntBASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 KRT18P64-201ENST00000434946 1219 ntBASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 AC024293.1-201ENST00000467930 498 ntBASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 MIR6858-201ENST00000620733 67 ntBASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 AC022748.3-201ENST00000621828 275 ntBASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CNTNAP3Q9BZ76 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 AC023141.7-201ENST00000430646 407 ntBASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 POM121L9P-203ENST00000441984 1285 ntBASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 TARDBPP1-201ENST00000442013 1203 ntBASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 TUBB8P8-201ENST00000458717 1058 ntBASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 AC093813.1-201ENST00000605066 256 ntBASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 AL513477.1-201ENST00000602865 2407 ntBASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 AL596257.1-201ENST00000641463 2694 ntBASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CNTNAP3Q9BZ76 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms