Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 AC023024.2-201ENST00000623561 1993 ntBASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 CICP11-201ENST00000434745 2827 ntBASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM62Q9BVG3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 MIR5189-201ENST00000577370 114 ntBASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 CLUHP6-201ENST00000580789 941 ntBASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 CICP6-201ENST00000457191 2729 ntBASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 AL158070.2-201ENST00000623713 1621 ntBASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 AL109954.1-202ENST00000564051 2148 ntBASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM62Q9BVG3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 AL162727.3-201ENST00000635661 2787 ntBASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 AL139094.1-201ENST00000405549 1188 ntBASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 AC068587.3-201ENST00000526613 355 ntBASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 TDH-203ENST00000531764 1110 ntBASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM62Q9BVG3 PPT1-215ENST00000641471 2368 ntBASIC16.02■□□□□ 0.15
TRIM62Q9BVG3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
TRIM62Q9BVG3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM62Q9BVG3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms