Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL13Q99616 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL13Q99616 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL13Q99616 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL13Q99616 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL13Q99616 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL13Q99616 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
CCL13Q99616 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL13Q99616 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CCL13Q99616 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL13Q99616 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 DGCR5-201ENST00000399539 862 ntBASIC12.94□□□□□ -0.34
CCL13Q99616 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.94□□□□□ -0.34
CCL13Q99616 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 ELK1P1-201ENST00000485699 580 ntBASIC12.94□□□□□ -0.34
CCL13Q99616 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.94□□□□□ -0.34
CCL13Q99616 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.94□□□□□ -0.34
CCL13Q99616 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.94□□□□□ -0.34
CCL13Q99616 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 AC092552.1-201ENST00000547243 906 ntBASIC12.94□□□□□ -0.34
CCL13Q99616 WASH4P-201ENST00000564273 1246 ntBASIC12.94□□□□□ -0.34
CCL13Q99616 SPDYE22P-201ENST00000582158 798 ntBASIC12.94□□□□□ -0.34
CCL13Q99616 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.94□□□□□ -0.34
CCL13Q99616 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.94□□□□□ -0.34
CCL13Q99616 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL13Q99616 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL13Q99616 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 AC138035.3-201ENST00000622706 2791 ntBASIC12.94□□□□□ -0.34
CCL13Q99616 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CCL13Q99616 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 AC148477.4-201ENST00000613430 1793 ntBASIC12.94□□□□□ -0.34
CCL13Q99616 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CCL13Q99616 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL13Q99616 AC022532.1-201ENST00000624563 1728 ntBASIC12.93□□□□□ -0.34
CCL13Q99616 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
CCL13Q99616 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCL13Q99616 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL13Q99616 AC134915.1-201ENST00000426461 574 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms