Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AC004066.1-201ENST00000502488 802 ntBASIC15.89■□□□□ 0.13
RPRD1AQ96P16 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 TDH-203ENST00000531764 1110 ntBASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 CLUHP6-201ENST00000580789 941 ntBASIC15.89■□□□□ 0.13
RPRD1AQ96P16 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 RPSAP52-203ENST00000622976 1023 ntBASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AL645728.2-202ENST00000641679 227 ntBASIC15.89■□□□□ 0.13
RPRD1AQ96P16 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RPRD1AQ96P16 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 AC112693.3-201ENST00000624819 1983 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TMEM14DP-201ENST00000422205 345 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ACTG1P3-201ENST00000431775 1114 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 AP001063.1-201ENST00000568332 529 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 AC009486.1-201ENST00000569860 813 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 MIR5189-201ENST00000577370 114 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 AC015936.2-201ENST00000593177 259 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 BX539320.1-201ENST00000623759 877 ntBASIC15.88■□□□□ 0.13
RPRD1AQ96P16 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RPRD1AQ96P16 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms