Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 AL355306.1-201ENST00000415580 579 ntBASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 AC011467.4-201ENST00000594891 528 ntBASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 AC139530.3-201ENST00000620344 690 ntBASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 AC092902.6-201ENST00000641783 218 ntBASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 AC007686.3-201ENST00000619017 3487 ntBASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
FOXRED1Q96CU9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AC084364.1-201ENST00000551967 1556 ntBASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 MIR346-201ENST00000362234 95 ntBASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AP006288.1-201ENST00000446065 395 ntBASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 AL691403.2-201ENST00000618460 490 ntBASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
FOXRED1Q96CU9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms