Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MYO15B-237ENST00000642007 4893 ntBASIC13.7□□□□□ -0.22
APH1AQ96BI3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 COX5BP8-201ENST00000416911 349 ntBASIC13.69□□□□□ -0.22
APH1AQ96BI3 NME2P1-201ENST00000426182 414 ntBASIC13.69□□□□□ -0.22
APH1AQ96BI3 AC005034.1-201ENST00000426657 489 ntBASIC13.69□□□□□ -0.22
APH1AQ96BI3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 CR383656.12-201ENST00000549567 513 ntBASIC13.69□□□□□ -0.22
APH1AQ96BI3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 TMBIM7P-203ENST00000641617 1718 ntBASIC13.69□□□□□ -0.22
APH1AQ96BI3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
APH1AQ96BI3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APH1AQ96BI3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
APH1AQ96BI3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APH1AQ96BI3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms