Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 AL596325.1-201ENST00000563991 1082 ntBASIC13.9□□□□□ -0.18
CPNE4Q96A23 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 AC025181.2-201ENST00000606994 802 ntBASIC13.9□□□□□ -0.18
CPNE4Q96A23 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CPNE4Q96A23 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.9□□□□□ -0.18
CPNE4Q96A23 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CPNE4Q96A23 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CPNE4Q96A23 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.9□□□□□ -0.19
CPNE4Q96A23 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 C1QBPP1-201ENST00000400117 770 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 VDAC1P7-201ENST00000462417 847 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 RN7SL752P-201ENST00000463779 287 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AP005018.1-201ENST00000525475 301 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AC005225.4-201ENST00000557330 545 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 AC120045.2-201ENST00000567334 178 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 CTBP2P3-201ENST00000585629 1255 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AC093813.1-201ENST00000605066 256 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AL645728.2-202ENST00000641679 227 ntBASIC13.89□□□□□ -0.19
CPNE4Q96A23 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CPNE4Q96A23 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
CPNE4Q96A23 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.88□□□□□ -0.19
CPNE4Q96A23 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.88□□□□□ -0.19
CPNE4Q96A23 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CPNE4Q96A23 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CPNE4Q96A23 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CPNE4Q96A23 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.88□□□□□ -0.19
CPNE4Q96A23 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.88□□□□□ -0.19
CPNE4Q96A23 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms