Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.47■□□□□ 0.39
SMARCE1Q969G3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.47■□□□□ 0.39
SMARCE1Q969G3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AC023141.5-201ENST00000458585 616 ntBASIC17.46■□□□□ 0.39
SMARCE1Q969G3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AC112482.1-201ENST00000492080 688 ntBASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AC010327.4-202ENST00000591484 748 ntBASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMARCE1Q969G3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCE1Q969G3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCE1Q969G3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCE1Q969G3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCE1Q969G3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SMARCE1Q969G3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC067750.1-201ENST00000608826 6545 ntBASIC17.45■□□□□ 0.38
SMARCE1Q969G3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC074338.1-201ENST00000416825 156 ntBASIC17.45■□□□□ 0.38
SMARCE1Q969G3 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 C8orf49-201ENST00000525043 1968 ntBASIC17.45■□□□□ 0.38
SMARCE1Q969G3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC007686.3-201ENST00000619017 3487 ntBASIC17.45■□□□□ 0.38
SMARCE1Q969G3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMARCE1Q969G3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCE1Q969G3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCE1Q969G3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCE1Q969G3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMARCE1Q969G3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCE1Q969G3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCE1Q969G3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMARCE1Q969G3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms