Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
STAG1Q8WVM7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 AC134312.5-201ENST00000568031 1313 ntBASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 ACTBP8-201ENST00000403258 1108 ntBASIC18.1■□□□□ 0.49
STAG1Q8WVM7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 MIR1909-201ENST00000411312 80 ntBASIC18.1■□□□□ 0.49
STAG1Q8WVM7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 HYMAI-201ENST00000635591 3347 ntBASIC18.1■□□□□ 0.49
STAG1Q8WVM7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
STAG1Q8WVM7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AL359258.3-201ENST00000622910 2331 ntBASIC18.09■□□□□ 0.49
STAG1Q8WVM7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 WASH3P-207ENST00000560956 1394 ntBASIC18.09■□□□□ 0.49
STAG1Q8WVM7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 MIR658-201ENST00000385210 100 ntBASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AC005229.1-201ENST00000392885 409 ntBASIC18.09■□□□□ 0.49
STAG1Q8WVM7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AC234783.1-201ENST00000441761 496 ntBASIC18.09■□□□□ 0.49
STAG1Q8WVM7 CROCCP4-201ENST00000457096 498 ntBASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18.09■□□□□ 0.49
STAG1Q8WVM7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.09■□□□□ 0.49
STAG1Q8WVM7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms