Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NKX2-3Q8TAU0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
NKX2-3Q8TAU0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 ZNF767P-206ENST00000513792 565 ntBASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 AC068587.3-201ENST00000526613 355 ntBASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NKX2-3Q8TAU0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 AL158070.2-201ENST00000623713 1621 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 IGHJ2P-201ENST00000454480 60 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 RPL13AP20-201ENST00000459725 609 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 AC106760.1-201ENST00000508690 800 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 GNRHR2-203ENST00000581100 1187 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 AC015967.2-201ENST00000624092 234 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 AC006435.4-201ENST00000625037 234 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 AL356737.1-201ENST00000634391 234 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 AC126365.1-201ENST00000578585 1514 ntBASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NKX2-3Q8TAU0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX2-3Q8TAU0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms